- kernscr an R package to perform kernel machine score test for pathway analysis in the presence of semi-competing risks. Available on CRAN, development version available on github.
- NPflow an R package to perform Dirichlet process mixture of multivariate normal, skew-normal or skew t-distributions modeling oriented towards flow-cytometry data preprocessing applications, using C++ code to speed up computations. Available on CRAN, development version on github.
tcgsaseq an R package to perform gene set analysis of longitudinal RNA-seq data with variance component score test, accounting for data heteroscedasticity through precision weights. Available on CRAN, development version on github.